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Cyanheads Obsidian MCP Server

Apache-licensed TypeScript MCP server for Obsidian vaults with stdio and Streamable HTTP transports, Local REST API access, note search, section-aware edits, tag/frontmatter management, path policies, and read-only controls.

by cyanheads · submitted by oktofeesh1·added 2026-06-06·
Review first review before installing

Open the source and read safety notes before installing.

Citation facts

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Source URLs
https://raw.githubusercontent.com/cyanheads/obsidian-mcp-server/main/README.md, https://github.com/cyanheads/obsidian-mcp-server
Brand
Cyanheads Obsidian MCP
Brand domain
github.com
Safety notes
Cyanheads Obsidian MCP can read, list, search, create, append, patch, replace, delete, tag, and edit frontmatter in the configured vault through the Local REST API plugin., The server defaults to full-vault access unless read paths, write paths, or read-only mode are configured., Set `OBSIDIAN_READ_ONLY=true` for research-only workflows, then narrow writes with `OBSIDIAN_WRITE_PATHS` before allowing note edits., Delete operations are permanent in the vault and should require human review even when the MCP host supports destructive-tool prompts., Command-palette tools are disabled unless `OBSIDIAN_ENABLE_COMMANDS=true`; command execution can trigger opaque or destructive Obsidian plugin behavior., Streamable HTTP deployments should use JWT or OAuth auth before being exposed beyond a trusted local machine.
Privacy notes
Vault notes, headings, block references, frontmatter, tags, file metadata, outgoing links, search queries, command names, plugin status, and edit history may be exposed to the MCP client and model provider., API keys, local plugin endpoints, HTTP auth settings, path allowlists, logs, OpenTelemetry traces, and Docker environment variables can reveal private vault structure or credentials., Tag listing is vault-wide in upstream behavior and can reveal tag names outside narrowed read paths., Notes may contain personal journals, client work, credentials, meeting notes, research plans, health data, or other sensitive knowledge-base content.
Author
cyanheads
Submitted by
oktofeesh1
Claim status
unclaimed
Last verified
2026-06-06

Decision playbook

Review trust signals before you adopt

Signals are present but mixed. Use the checklist below to confirm the source and operational safety for your environment.

Compare context
Selected

0

Current score

63

Baseline

Delta

No baseline selected

No major trust-signal divergence detected in the current selection.

Source and provenance checks

Needs review

Confirm ownership and provenance before trusting install instructions.

  • Source link availableRequired

    Open the canonical repository and verify ownership.

    Done
  • Source provenance statusRequired

    Marked as source-backed.

    Done
  • Metadata reviewed

    No reviewed flag detected in metadata.

    Pending

Safety and privacy checks

Complete

Validate risk disclosures before installation or API wiring.

  • Safety notes presentRequired

    Review the listed safety guidance before running commands.

    Done
  • Privacy notes presentRequired

    Review data handling notes before connecting accounts or secrets.

    Done
  • Trust level risk gateRequired

    Trust level does not block evaluation.

    Done

Package and install checks

Needs review

Check package metadata and artifact integrity signals.

  • Install payload available

    Install or copy payload is available for review.

    Done
  • Package verification flag

    No package verification flag provided.

    Pending
  • Checksum metadata

    No checksum provided for downloaded artifact.

    Pending

Compare-driven decision checks

Needs review

Use compare context to validate trade-offs before adoption.

  • Compare tray has multiple entries

    Add at least one more entry to compare trust differences.

    Pending
  • Baseline comparison available

    No baseline peer selected yet.

    Pending
  • Diverging trust signals identified

    No major trust-signal divergence found.

    Pending

Setup at a glance

CLI install

Copy-ready — paste the snippet to get started.

20 minutes

Adoption plan

Balanced adoption plan

Current risk score 24/100. Use staged verification before broader rollout.

Risk 24

Pre-adoption checks

Validate source and review signals before any execution.

  • Confirm source provenanceRequired

    Source URL/provenance metadata is present.

    Done
  • Confirm metadata review state

    No review metadata found; increase manual validation.

    Pending
  • Verify install payload

    Install/config payload exists and can be inspected.

    Done

Security checks

Confirm safety, privacy, and package integrity signals.

  • Review safety notesRequired

    Safety notes are present.

    Done
  • Review privacy notesRequired

    Privacy notes are present.

    Done
  • Verify package integrity metadata

    No package verification/checksum metadata.

    Pending

Rollout

Adopt in controlled steps based on the selected plan.

  • Run in isolated sandbox firstRequired

    Use a constrained sandbox and observe behavior across multiple tasks.

    Pending
  • Roll out graduallyRequired

    Roll out to a small cohort before wider usage.

    Pending
  • Set monitoring and fallback

    Define rollback path and monitor errors after adoption.

    Pending

Evidence readiness

Evidence readiness matrix · balanced

Missing required evidence: Metadata review. Risk score 31.

Risk 31

Source provenance

Present

Source repository/provenance is listed.

Required in this preset

Metadata review

Missing

Review metadata is missing.

Required in this preset

Safety notes

Present

Safety notes are present.

Required in this preset

Privacy notes

Present

Privacy notes are present.

Optional in this preset

Package integrity

Missing

Package integrity metadata is missing.

Optional in this preset

Install payload

Present

Install payload is available.

Required in this preset

Required gaps: Metadata review

Decision timeline

Decision timeline · balanced

Blocking gaps: Check metadata review status. Risk 28.

Risk 28

triage

Confirm source provenanceRequired

Source/provenance metadata is available.

Done

triage

Check metadata review statusRequired

Review metadata is missing.

Pending

verify

Review safety notesRequired

Safety notes are available.

Done

verify

Review privacy notes

Privacy notes are available.

Done

verify

Validate package integrity metadata

Package integrity metadata is missing.

Pending

rollout

Verify install payload and commandsRequired

Install payload is available.

Done

Blockers: Check metadata review status

Prerequisite readiness

Prerequisite readiness

5 prerequisites to line up before setup. Have accounts and credentials ready first. Includes a review or approval gate.

0/5 ready
Account & credentials1Install & runtime1Review & approval2General120 minutes

Safety & privacy surface

Safety & privacy surface

6 safety and 4 privacy notes across 5 risk areas. Review closely: credentials & tokens, third-party handling.

5 areas
  • SafetyGeneralCyanheads Obsidian MCP can read, list, search, create, append, patch, replace, delete, tag, and edit frontmatter in the configured vault through the Local REST API plugin.
  • SafetyLocal filesThe server defaults to full-vault access unless read paths, write paths, or read-only mode are configured.
  • SafetyLocal filesSet `OBSIDIAN_READ_ONLY=true` for research-only workflows, then narrow writes with `OBSIDIAN_WRITE_PATHS` before allowing note edits.
  • SafetyExecution & processesDelete operations are permanent in the vault and should require human review even when the MCP host supports destructive-tool prompts.
  • SafetyExecution & processesCommand-palette tools are disabled unless `OBSIDIAN_ENABLE_COMMANDS=true`; command execution can trigger opaque or destructive Obsidian plugin behavior.
  • SafetyCredentials & tokensStreamable HTTP deployments should use JWT or OAuth auth before being exposed beyond a trusted local machine.
  • PrivacyThird-party handlingVault notes, headings, block references, frontmatter, tags, file metadata, outgoing links, search queries, command names, plugin status, and edit history may be exposed to the MCP client and model provider.
  • PrivacyCredentials & tokensAPI keys, local plugin endpoints, HTTP auth settings, path allowlists, logs, OpenTelemetry traces, and Docker environment variables can reveal private vault structure or credentials.
  • PrivacyLocal filesTag listing is vault-wide in upstream behavior and can reveal tag names outside narrowed read paths.
  • PrivacyCredentials & tokensNotes may contain personal journals, client work, credentials, meeting notes, research plans, health data, or other sensitive knowledge-base content.

Safety notes

  • Cyanheads Obsidian MCP can read, list, search, create, append, patch, replace, delete, tag, and edit frontmatter in the configured vault through the Local REST API plugin.
  • The server defaults to full-vault access unless read paths, write paths, or read-only mode are configured.
  • Set `OBSIDIAN_READ_ONLY=true` for research-only workflows, then narrow writes with `OBSIDIAN_WRITE_PATHS` before allowing note edits.
  • Delete operations are permanent in the vault and should require human review even when the MCP host supports destructive-tool prompts.
  • Command-palette tools are disabled unless `OBSIDIAN_ENABLE_COMMANDS=true`; command execution can trigger opaque or destructive Obsidian plugin behavior.
  • Streamable HTTP deployments should use JWT or OAuth auth before being exposed beyond a trusted local machine.

Privacy notes

  • Vault notes, headings, block references, frontmatter, tags, file metadata, outgoing links, search queries, command names, plugin status, and edit history may be exposed to the MCP client and model provider.
  • API keys, local plugin endpoints, HTTP auth settings, path allowlists, logs, OpenTelemetry traces, and Docker environment variables can reveal private vault structure or credentials.
  • Tag listing is vault-wide in upstream behavior and can reveal tag names outside narrowed read paths.
  • Notes may contain personal journals, client work, credentials, meeting notes, research plans, health data, or other sensitive knowledge-base content.

Prerequisites

  • Node.js 24 or newer, or Bun 1.3.11 or newer.
  • Obsidian vault with the Obsidian Local REST API community plugin enabled.
  • Local REST API key stored in the MCP client environment.
  • Stdio MCP client, or reviewed Streamable HTTP deployment with authentication.
  • Vault path allowlists and read-only policy reviewed before allowing write tools.

Schema details

Install type
cli
Troubleshooting
No
Source repository stats
Scope
Source repo
Collection metadata
Estimated setup
20 minutes
Difficulty
advanced
Full copyable content
{
  "mcpServers": {
    "cyanheads-obsidian": {
      "command": "npx",
      "args": ["-y", "obsidian-mcp-server@latest"],
      "env": {
        "MCP_TRANSPORT_TYPE": "stdio",
        "OBSIDIAN_API_KEY": "{obsidian-local-rest-api-key}",
        "OBSIDIAN_READ_ONLY": "true"
      }
    }
  }
}

About this resource

Content

Cyanheads Obsidian MCP Server is a TypeScript MCP server for working with an Obsidian vault through the Obsidian Local REST API plugin. It provides both stdio and Streamable HTTP transports, with tools for reading notes, listing paths, searching content, managing tags and frontmatter, opening notes in the Obsidian UI, and editing vault content.

This entry covers the separate cyanheads/obsidian-mcp-server implementation. The catalog also includes MarkusPfundstein/mcp-obsidian, which is a different Python package with a smaller Obsidian Local REST API bridge.

Source Review

These sources were reviewed on 2026-06-06. Prefer the live repository, README, npm package metadata, server manifest, license, tool-registration source, configuration source, and path-policy implementation for current setup, runtime requirements, tool behavior, and safety controls.

Features

  • NPM package obsidian-mcp-server with an obsidian-mcp-server binary.
  • Stdio and Streamable HTTP transport modes.
  • Obsidian Local REST API integration for vault access.
  • Read tools for notes, directories, tags, selected files, and vault status.
  • Text, JSONLogic, and optional Omnisearch-backed note search.
  • Section-aware note reads across content, full metadata, document maps, and single sections.
  • Write tools for creating, appending, patching, replacing, deleting, and opening notes.
  • Frontmatter and tag management tools.
  • Optional command-palette listing and execution behind an explicit OBSIDIAN_ENABLE_COMMANDS flag.
  • Folder-scoped read and write allowlists through OBSIDIAN_READ_PATHS and OBSIDIAN_WRITE_PATHS.
  • Global OBSIDIAN_READ_ONLY kill switch for suppressing write and command tools.
  • Resources for vault notes, tags, and Obsidian/server status.
  • Optional Streamable HTTP authentication through the underlying MCP framework.

Installation

Install and enable the Obsidian Local REST API community plugin in the target vault, then generate an API key from the plugin settings. Start with read-only mode enabled:

{
  "mcpServers": {
    "cyanheads-obsidian": {
      "command": "npx",
      "args": ["-y", "obsidian-mcp-server@latest"],
      "env": {
        "MCP_TRANSPORT_TYPE": "stdio",
        "OBSIDIAN_API_KEY": "{obsidian-local-rest-api-key}",
        "OBSIDIAN_READ_ONLY": "true"
      }
    }
  }
}

Only disable read-only mode after defining which vault paths the agent may read or write. For repeated local use, keep API keys in MCP client environment configuration rather than prompts, notes, or committed files.

Use Cases

  • Ask Claude to retrieve a note, heading, block reference, or frontmatter field from an Obsidian vault.
  • Search project notes with text, JSONLogic, or Omnisearch when the optional plugin is reachable.
  • Create draft notes in a scoped inbox folder.
  • Patch a known section after using a document map to identify the target.
  • Manage frontmatter or tags for a controlled set of project notes.
  • Open a note in the Obsidian UI for human review.
  • Run a read-only knowledge-base assistant over public or work-approved vault paths.

Safety and Privacy

Treat this server as direct vault access. Start in read-only mode, use OBSIDIAN_READ_PATHS and OBSIDIAN_WRITE_PATHS to narrow the blast radius, and require human approval before creating, replacing, patching, deleting, or retagging notes. Avoid enabling command-palette tools unless each command ID and installed Obsidian plugin has been reviewed.

Vault contents often include sensitive or personal material. Even path-scoped read access can reveal filenames, tags, headings, frontmatter keys, links, and search intent. Keep the Local REST API key private, prefer local stdio for personal use, and add authentication before exposing Streamable HTTP beyond a trusted local environment.

Duplicate Check

No cyanheads/obsidian-mcp-server, obsidian-mcp-server npm package entry, or matching source URL was found in content/mcp or README.md. The existing Obsidian MCP entry covers MarkusPfundstein/mcp-obsidian; this entry covers a separate TypeScript server with stdio/HTTP transports, path policies, read-only mode, command-palette gating, and a broader Local REST API tool surface.

Source citations

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How it compares

Cyanheads Obsidian MCP Server side by side with 3 alternatives on trust, install, platform support, and disclosed safety notes — all from reviewed registry metadata.

Field

Apache-licensed TypeScript MCP server for Obsidian vaults with stdio and Streamable HTTP transports, Local REST API access, note search, section-aware edits, tag/frontmatter management, path policies, and read-only controls.

Open dossier

Official Agentset MCP server that lets Claude retrieve cited knowledge-base results from an Agentset namespace through the `knowledge-base-retrieve` tool, with optional tenant scoping and custom tool descriptions.

Open dossier

MCP server for the Graphlit platform, enabling Claude to ingest, search, retrieve, organize, and operate on files, web pages, feeds, collections, conversations, memory, connectors, crawls, and RAG-ready project knowledge.

Open dossier

Code intelligence MCP server with a Zig core for local project indexing, structural outlines, symbol lookup, search, dependency graphs, snapshots, remote public-repo queries, and fallback edits.

Open dossier
Next steps
Trust
Review statusNot reviewedNot reviewedNot reviewedNot reviewed
Package trustPackage not verifiedPackage not verifiedPackage not verifiedPackage not verified
Source provenanceSource-backedSource-backedSource-backedSource-backed
Submitteroktofeesh1oktofeesh1oktofeesh1oktofeesh1
Install riskReview firstReview firstReview firstReview first
Notes Safety ✓ Privacy ✓ Safety ✓ Privacy ✓ Safety ✓ Privacy ✓ Safety ✓ Privacy ✓
BrandAgentset logoAgentsetGraphlit MCP Server logoGraphlit MCP ServerCodeDB logoCodeDB
Categorymcpmcpmcpmcp
SourceSource-backedSource-backedSource-backedSource-backed
AuthorcyanheadsAgentsetGraphlitjustrach
Added2026-06-062026-06-062026-06-062026-06-06
Platforms
Harness
Source repo
Safety notesCyanheads Obsidian MCP can read, list, search, create, append, patch, replace, delete, tag, and edit frontmatter in the configured vault through the Local REST API plugin. The server defaults to full-vault access unless read paths, write paths, or read-only mode are configured. Set `OBSIDIAN_READ_ONLY=true` for research-only workflows, then narrow writes with `OBSIDIAN_WRITE_PATHS` before allowing note edits. Delete operations are permanent in the vault and should require human review even when the MCP host supports destructive-tool prompts. Command-palette tools are disabled unless `OBSIDIAN_ENABLE_COMMANDS=true`; command execution can trigger opaque or destructive Obsidian plugin behavior. Streamable HTTP deployments should use JWT or OAuth auth before being exposed beyond a trusted local machine.The MCP server sends Claude's retrieval queries to the Agentset API using the configured API key and namespace. The `knowledge-base-retrieve` tool can return up to 100 results per call and can rerank results by relevance. Namespace and tenant selection control which indexed documents are searchable; review them before connecting a shared agent. API keys should be scoped, rotated, and stored only in the MCP server environment or a secret manager. Custom tool descriptions can influence when the model calls the retrieval tool, so review them before use in production workflows.Graphlit MCP Server can ingest files, web pages, messages, posts, emails, issues, text, memory, feeds, crawls, and connected SaaS data into a Graphlit project. Tools can create or delete contents, feeds, collections, conversations, specifications, and workflows, and can configure project defaults when explicitly requested. Web crawling, web search, screenshots, podcast search, feed scheduling, publishing, and connector operations may contact third-party services and process external content. Generated audio and image publishing can call configured model/provider services and consume credits or quota. Require confirmation before ingesting private repositories, emails, drive files, Slack/Teams/Discord data, customer documents, large crawls, generated media, deletion operations, or project configuration changes.CodeDB indexes local projects and exposes file tree, outline, search, symbol, caller, dependency, read, snapshot, project, and context tools to the MCP client. CodeDB's `codedb_edit` tool exists as a fallback editing tool and can create, replace, insert, delete, or modify files when used by a client without native edit tooling. The npm package runs a postinstall step that downloads a native binary from GitHub Releases; review package and release provenance in environments that restrict native binaries. Remote repo queries use the public `api.wiki.codes` service and should be treated as network access outside the local repository. The upstream README marks the project as alpha software, with parser coverage and snapshot formats still stabilizing.
Privacy notesVault notes, headings, block references, frontmatter, tags, file metadata, outgoing links, search queries, command names, plugin status, and edit history may be exposed to the MCP client and model provider. API keys, local plugin endpoints, HTTP auth settings, path allowlists, logs, OpenTelemetry traces, and Docker environment variables can reveal private vault structure or credentials. Tag listing is vault-wide in upstream behavior and can reveal tag names outside narrowed read paths. Notes may contain personal journals, client work, credentials, meeting notes, research plans, health data, or other sensitive knowledge-base content.Retrieved chunks can include private documents, product specs, policies, support content, internal procedures, historical project information, or customer-specific data. Retrieval queries, namespace IDs, tenant IDs, document chunks, citations, and tool outputs may be visible to the MCP client, model provider, Agentset logs, and application telemetry. Tenant IDs are useful for data segregation, but incorrect tenant or namespace configuration can expose the wrong knowledge base. Do not paste API keys, namespace IDs, tenant IDs, or retrieved private chunks into shared issue reports, screenshots, or repository files.Graphlit environment IDs, organization IDs, JWT secrets, project IDs, resource IDs, connector tokens, URLs, files, emails, messages, issues, transcripts, screenshots, memories, conversations, usage records, and retrieved sources can be exposed to the MCP client. Ingested documents may be extracted to Markdown; audio and video may be transcribed; images and pages may be described or screenshot. Connected services such as Slack, Discord, Google Drive, Microsoft 365, GitHub, Jira, Linear, Notion, Dropbox, Box, Reddit, and Twitter/X can expose private workspace content. Usage records can include request, response, variables, token counts, bytes, units, and credit charges for project operations. Keep Graphlit secrets in local MCP client configuration only, and review retention, deletion, and connector policies before ingesting regulated or customer data.Local indexes, snapshots, file trees, symbol names, dependency graphs, snippets, read results, and search results can reveal proprietary code structure and implementation details. Upstream documents sensitive-file blocking for patterns such as environment files, credentials, and keys, but users should still review ignore rules and avoid indexing secret-heavy directories. CodeDB writes telemetry to `~/.codedb/telemetry.ndjson` unless `CODEDB_NO_TELEMETRY=1` is set, then syncs aggregate tool counts, latency, startup, file count, line count, language, version, and platform data on MCP session close. Upstream telemetry docs state that source code, file contents, file paths, and search queries are not collected. Remote public-repo queries and local MCP responses may still be logged by MCP clients, model providers, and terminal history.
Prerequisites
  • Node.js 24 or newer, or Bun 1.3.11 or newer.
  • Obsidian vault with the Obsidian Local REST API community plugin enabled.
  • Local REST API key stored in the MCP client environment.
  • Stdio MCP client, or reviewed Streamable HTTP deployment with authentication.
  • Agentset account or self-hosted Agentset deployment with a populated namespace.
  • Agentset API key with access to the namespace Claude should query.
  • Node.js 18.17 or newer for running the `@agentset/mcp` package.
  • Namespace ID selected with `--ns` or `AGENTSET_NAMESPACE_ID`.
  • Active Graphlit platform account and project access.
  • Graphlit organization ID, environment ID, and JWT secret from the Graphlit API settings dashboard.
  • Node.js 18 or newer for the npm stdio server.
  • Review of which files, URLs, feeds, SaaS connectors, memories, conversations, collections, and web crawls Claude may create or query.
  • macOS or Linux on x64 or arm64 for the published native binary launcher.
  • Node.js 18 or newer when using the `codedeebee` npm launcher.
  • A local project directory that the MCP client exposes through roots or launches from.
  • Review of which local repositories, file types, generated artifacts, and secrets patterns may be indexed.
Install
npx -y obsidian-mcp-server@latest
Run `npx @agentset/mcp --ns <namespace-id>` with `AGENTSET_API_KEY` set in the MCP server environment.
npx -y graphlit-mcp-server
npx -y codedeebee mcp
Config
{
  "mcpServers": {
    "cyanheads-obsidian": {
      "command": "npx",
      "args": ["-y", "obsidian-mcp-server@latest"],
      "env": {
        "MCP_TRANSPORT_TYPE": "stdio",
        "OBSIDIAN_API_KEY": "{obsidian-local-rest-api-key}",
        "OBSIDIAN_READ_ONLY": "true"
      }
    }
  }
}
{
  "mcpServers": {
    "agentset": {
      "command": "npx",
      "args": ["-y", "@agentset/mcp@latest", "--ns", "ns_xxx"],
      "env": {
        "AGENTSET_API_KEY": "agentset_xxx"
      }
    }
  }
}
{
  "mcpServers": {
    "graphlit": {
      "command": "npx",
      "args": [
        "-y",
        "graphlit-mcp-server"
      ],
      "env": {
        "GRAPHLIT_ORGANIZATION_ID": "your-organization-id",
        "GRAPHLIT_ENVIRONMENT_ID": "your-environment-id",
        "GRAPHLIT_JWT_SECRET": "your-jwt-secret"
      },
      "type": "stdio"
    }
  }
}
{
  "mcpServers": {
    "codedb": {
      "command": "npx",
      "args": [
        "-y",
        "codedeebee",
        "mcp"
      ],
      "type": "stdio"
    }
  }
}
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